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Table 1 Primer sequences and restriction enzymes used for the analysis of CAPN-10 gene polymorphisms

From: Association of Calpain-10 gene polymorphisms with Type 2 diabetes mellitus: a case-control study from a tertiary care hospital in Pakistan

SNP

Primer Sequence

5’ → 3’

PCR Product

Restriction Enzyme

Restriction Product

(bp)

SNP-43 (rs3792267)

G→A

F: gct ggc tgg tga cat cag tgc

245 bp

NdeI

GG: 245

GA: 245, 223, 31

AA: 223, 31

R: acc aag tca agg ctt agc ctc acc ttc ata

SNP-44 (rs2975760)

T→C

F: gca ggg cgc tca cgc ttg ccg

166 bp

BstUl

TT: 166

TC: 166, 145, 21

CC:145, 21

R: gca tgg ccc cct ctc tga ttc

  1. SNP: Single Nucleotide Polymorphism; PCR: Polymerase Chain Reaction; bp: Base Pair; NdeI: A restriction enzyme used for digesting DNA at specific sites; BstUI: A restriction enzyme used for DNA fragment analysis