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Table 4 Statistical Interpretation of Data in Fig. 3A

From: N6-methyladenosine RNA base modification regulates NKG2D-dependent and cytotoxic genes expression in natural killer cells

 

Transcript Enrichment in

 

NKG2D

PI3K

VAV1

PAK1

ERK2

PRF1

GZMH

FASL

TRAIL

Controls IP fraction relative to Input Control

Ns change

(P = 0.0814)

1.5-fold higher (P = 0.0098)

1.6-fold lower

(P < 0.0001)

1.5-fold lower

(P = 0.0029)

fivefold lower (P < 0.0001)

2.3-fold higher (P = 0.0005)

2.6-fold lower (P < 0.0001)

1.6-fold lower (P = 0.0036)

1.3-fold lower (P < 0.0001)

BC Patient IP fraction relative to Input Control

1.7-fold higher (P = 0.0417)

Ns Change (P = 0.2682)

twofold lower (P = 0.0253)

Ns Change (P = 0.5620)

sevenfold lower (P = 0.0003)

twofold higher (P = 0.0062)

Ns Change (P = 0.0668)

1.9-fold lower (P = 0.0258)

Ns change (P = 0.2202)

BC Patient IP fraction relative to Controls IP fraction **

1.5-fold higher (P = 0.0212, q = 0.0466)

Ns change (P = 0.5517, q = 0.4809)

Ns change (P = 0.1849, q = 0.2441)

Ns change (P = 0.5829, q = 0.4809)

1.4-fold lower (P = 0.0173, q = 0.0466)

1.2-fold lower (P = 0.012, q = 0.0466)

Ns change (P = 0.1526, q = 0.2441)

Ns change (P = 0.3018, q = 0.332)

Ns change (P = 0.9413, q = 0.6903)

  1. **Q-values (adjusted p-values) were obtained using the FDR correction with Q set at 10%