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Table 2 Multilocus sequence typing, virulence genes, antimicrobial and antiseptic resistance genes of the isolates with their hospitals of origins

From: Genomic detection of Panton-Valentine Leucocidins encoding genes, virulence factors and distribution of antiseptic resistance determinants among Methicillin-resistant S. aureus isolates from patients attending regional referral hospitals in Tanzania

Sample IDs

Hospital of origin

Species

MLST

Resistance genes

Virulence factors

Antiseptic gene

FFDD_125

Dodoma Regional Referral Hospital

S. aureus

ST-789

aac (6’)-aph (2’’), aph (3’)-III, blaZ, dfrG, erm(C), mecA, mph(E), msr (E), tet(K)

aur, edinB, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sep, splA, splB, splE

qacD

FFDD_2385

Dodoma Regional Referral Hospital

S. aureus

ST-8

blaZ, mecA

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, splA, splB

Not Found

FFMG_214-1-21

Morogoro Regional Referral Hospital

S. aureus

ST-8

aac (6’)-aph (2’’), blaZ, dfrG, erm(C), mecA

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sec, sej, sel, ser, splA, splB, splE, tst

qacD

FFMG_347-07-21

Morogoro Regional Referral Hospital

S. aureus

ST-8

aac (6’)-aph (2’’), blaZ, dfrG, erm(C), mecA, tet(K)

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sej, ser, splA, splB

qacD

FFMG_267-2-21

Morogoro Regional Referral Hospital

S. aureus

ST-8

aac (6’)-aph (2’’), blaZ, dfrG, erm(C), mecA

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sej, ser, splA, splB, splE

Not Found

FFMG_55-7-21B-S-CO

Morogoro Regional Referral Hospital

S. aureus

ST-8

aac (6’)-aph (2’’), blaZ, dfrG, erm(C), mecA, sul2, tet(K)

ElrA, SrtA, ace, astA, aur, cCF10, cad, camE, efaAfs, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sej, ser, splA, splB, tpx

qacD

FFZB_150

Mnazi Mmoja Referral Hospital

S. aureus

ST-121

aac (6’)-aph (2’’), blaZ, dfrG, mecA, tet(K)

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, seb, seg, sei, sej, sem, sen, seo, sep, ser, seu, splA, splB, splE

qacD

FFZB_192A-R57

Mnazi Mmoja Referral Hospital

S. aureus

ST-8

blaZ, dfrG, mecA, tet(K)

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sej, sep, ser, splA, splB, splE

qacD

FFZB_200-C

Mnazi Mmoja Referral Hospital

S. aureus

ST-88

aac (6’)-aph (2’’), blaZ, dfrA17, dfrG, mecA, tet(K)

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, papA_F43, sak, scn, sej, sep, ser, shiB, splA, splB, splE, traT

qacD

FFZB_64

Mnazi Mmoja Referral Hospital

S. aureus

ST-8

aac (6’)-aph (2’’), blaZ, dfrG, mecA, tet(K)

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sej, sep, ser, splA, splB, splE

qacD

FFZB_71

Mnazi Mmoja Referral Hospital

S. aureus

ST-88

aac (6’)-aph (2’’), blaZ, dfrG, mecA, tet(K)

aur, hlgA, hlgB, hlgC, lukD, lukE, lukF-PV, lukS-PV, sak, scn, sej, sep, ser, splA, splB

qacD