Skip to main content

Table 1 Genotypes and phenotypes associated with patient’s duplication in the OMIM database

From: Genetic analysis of partial duplication of the long arm of chromosome 16

Gene

CTCF

CNOT1

VPS4A

GNAO1

VAC14

RSPRY1

CYLD

IRX5

ZNF423

OMIM

604,167

604,917

609,982

139,311

604,632

616,585

605,018

606,195

604,557

Cytogenetic

16q22.1

16q21

16q22.1

16q13

16q22.1-q22.2

16q13

16q12.1

16q12.2

16q12.1

Inheritance

AD

AD;

AD

AD

AD;

AD

AR

AR

AD

AR

AD, AR;

AD, AR

Phenotype

Intellectual developmental disorder, autosomal dominant 21

Holoprosencephaly 12, with or without pancreatic agenesis;

Vissers-Bodmer syndrome

CIMDAG syndrome

Developmental and epileptic encephalopathy 17

Neurodevelopmental disorder with involuntary movements

Striatonigral degeneration, childhood-onset

Spondyloepimetaphyseal dysplasia

Faden-Alkuraya type

Frontotemporal dementia and/or amyotrophic lateral sclerosis 8

Brooke-Spiegler syndrome

Cylindromatosis, familial

Trichoepithelioma, multiple familial, 1

Hamamy syndrome

Joubert syndrome 19

Nephronophthisis 14

Dysfunction of Gene Product

DNA-binding transcription factor; regulating gene expression and chromatin organization

the central scaffolding protein (in)directly binding to all CCR4-NOT partners

critical enzyme regulating endosomal sorting complexes required for transport (ESCRT) function

encodes Gαo, the α subunit of Go; are involved as modulators or transducers in various transmembrane signaling systems

a trimolecular complex that tightly regulates the level of phosphatidylinositol 3,5-bisphosphate [PI (3,5) P2]

encodes a hypothetical RING and SPRY domain-containing protein

a ubiquitin hydrolase; specifically cleaves ‘Lys-63’- and linear ‘Met-1’-linked polyubiquitin chains and is involved in NF-kappa-B activation and TNF-alpha-induced necroptosis

Involved in craniofacial and gonadal development; the regulation of human ventricular depolarization and cardiac electrical conduction

a central role in BMP signaling and olfactory neurogenesis

a

1

1

1

0.99

0.99

0.99

0.98

0.98

0.96

  1. agnomAD (v2.1.1) pTriplo, pTriplo scores ≥ 0.94 indicate that the average effect sizes of duplications are as strong as the loss-of-function of genes known to be constrained against protein truncating variants [9]