Skip to main content

Table 7 Enriched Kegg pathways in combined HCC samples

From: Genomic landscape of hepatocellular carcinoma in Egyptian patients by whole exome sequencing

Term

Gene count

%

P-values

Individual samples p < 0.05

Individual samples p < 0.1

Freq %

ECM-receptor interaction

50

0.8

1.2E-6

LT6, LT7, LT10, LT13, LT14, LT16, LT19, LT20

 

61%

Focal adhesion

86

1.4

3.6E-4

LT6, LT11, LT13, LT14, LT16, LT17

 

46%

Notch signaling

33

0.5

4.1E-4

LT7, LT8,

LT16

23%

Calcium signaling

96

1.6

9.3E-3

LT7, LT8

LT17

23%

Wnt signaling

68

1.1

1.4E-2

LT8

LT11

15%

PI3K-Akt signaling

130

2.2

1.5E-2

LT13, LT14

LT10, LT19, LT20

38.4%

Apelin signaling

39

1.0

2.3E-2

LT8, LT13

 

15%

Hippo signaling

12

1.7

1.5E-2

LT7

 

7.5%

Hedgehog signaling

11

0.7

2.0E-2

LT13

 

7.5%

MAPK signaling

20

2.2

3.2E-2

LT14

 

7.5%